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July 25, 2025Open Access

DNA Conformational Flexibility Descriptors Improve Transcription Factor Binding Prediction Across the Protein Families

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Authors

UDUpalabdha DeyVYVenkata Rajesh YellaAKAditya Kumar

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Overview

Systematic integration of DNA flexibility descriptors improves binding predictions in transcription factors, suggesting a critical role in gene regulation.

Key Points

  • The study reveals that DNA flexibility plays a key role in transcription factor binding predictions.
  • Flexibility-augmented predictive models outperform traditional sequence and shape models in accuracy.
  • Distinct 'flexibility hotspots' were identified within binding sites that significantly influence binding affinity.
  • Findings underscore the importance of DNA conformational dynamics in enhancing the understanding of gene regulatory networks.

Cite This Study

Dey et al. (2025) studied this question.

synapsesocial.com/papers/689a0627e6551bb0af8ce28ahttps://doi.org/10.1101/2025.07.20.665724
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